CDS

Accession Number TCMCG040C50004
gbkey CDS
Protein Id RDX64850.1
Location join(<5786..5876,5954..6045,6116..6215,6255..6382,6649..6715,7806..7897,8168..8242,8615..8719,9205..9288,9454..9597)
Gene NTH2
Organism Mucuna pruriens
locus_tag CR513_56539

Protein

Length 325aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA414658, BioSample:SAMN07821433
db_source QJKJ01014190.1
Definition Endonuclease III-like 2, chloroplastic, partial [Mucuna pruriens]
Locus_tag CR513_56539

EGGNOG-MAPPER Annotation

COG_category L
Description Bifunctional DNA N-glycosylase with associated apurinic apyrimidinic (AP) lyase function that catalyzes the first step in base excision repair (BER), the primary repair pathway for the repair of oxidative DNA damage. The DNA N-glycosylase activity releases the damaged DNA base from DNA by cleaving the N- glycosidic bond, leaving an AP site. The AP lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination. Primarily recognizes and repairs oxidative base damage of pyrimidines
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko03400        [VIEW IN KEGG]
KEGG_ko ko:K10773        [VIEW IN KEGG]
EC 4.2.99.18        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko03410        [VIEW IN KEGG]
map03410        [VIEW IN KEGG]
GOs GO:0000702        [VIEW IN EMBL-EBI]
GO:0000703        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0003906        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005783        [VIEW IN EMBL-EBI]
GO:0005911        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006259        [VIEW IN EMBL-EBI]
GO:0006281        [VIEW IN EMBL-EBI]
GO:0006284        [VIEW IN EMBL-EBI]
GO:0006285        [VIEW IN EMBL-EBI]
GO:0006289        [VIEW IN EMBL-EBI]
GO:0006296        [VIEW IN EMBL-EBI]
GO:0006464        [VIEW IN EMBL-EBI]
GO:0006479        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006974        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008168        [VIEW IN EMBL-EBI]
GO:0008170        [VIEW IN EMBL-EBI]
GO:0008213        [VIEW IN EMBL-EBI]
GO:0008276        [VIEW IN EMBL-EBI]
GO:0008757        [VIEW IN EMBL-EBI]
GO:0009295        [VIEW IN EMBL-EBI]
GO:0009506        [VIEW IN EMBL-EBI]
GO:0009507        [VIEW IN EMBL-EBI]
GO:0009532        [VIEW IN EMBL-EBI]
GO:0009536        [VIEW IN EMBL-EBI]
GO:0009570        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0012505        [VIEW IN EMBL-EBI]
GO:0016278        [VIEW IN EMBL-EBI]
GO:0016279        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0016741        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016798        [VIEW IN EMBL-EBI]
GO:0016799        [VIEW IN EMBL-EBI]
GO:0018022        [VIEW IN EMBL-EBI]
GO:0018193        [VIEW IN EMBL-EBI]
GO:0018205        [VIEW IN EMBL-EBI]
GO:0019104        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0030054        [VIEW IN EMBL-EBI]
GO:0032259        [VIEW IN EMBL-EBI]
GO:0033554        [VIEW IN EMBL-EBI]
GO:0033683        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0036211        [VIEW IN EMBL-EBI]
GO:0042644        [VIEW IN EMBL-EBI]
GO:0042646        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0043414        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044434        [VIEW IN EMBL-EBI]
GO:0044435        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0055044        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0090305        [VIEW IN EMBL-EBI]
GO:0140096        [VIEW IN EMBL-EBI]
GO:0140097        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTCGTTGGTTTCTTTGTTTGGTTTGGGGCGAATCAAAGTCTCAGTGTGTGGGAAAACAACAAAATGCTTTTCCTCTAAAACCCATCCAGTGTCGCAAGTTCGAATCTCTGAGAGTAACAAGAGAGCCAAAAAAAGCGCGCAACTTCAACATGTGCCCGAAACTGAAATTGAAGACCACAACTTTCCCCCTACGCAGGAGATCCGAGAATTTGCACACACAGAATCAAATGAATTGTCTCAAAGTAGTAGTAAGTGCCTCTTGTCTGAAGGTTGCATCCTTGGTGAGTCTCCTGCACATTGGAAAAATGTTCTTGAAGGGATTCGCCAAATGAGGAGTTTTTCTGCAGATGAACACCAACCGGTAGATACTATTGCCTGTGAGAAAGATGGTGATGCTCAACCTCCTAAGGAAAGAAGATTTGCTGTCCTGGCATCTTCCCTTTTATCAAGCCAAACTAAGGAGCATGTTACTCGTGGAGCAACTCAACGTCTTCATGAAAATGGTCTGCTTACTGCTGATGCAATGAACAAAGCTGATGAAGAAACCATCAAAAAGTTGATTTACCCTTATGATGGAGACATACCTAGCTCAATTGAGGAACTACTCTTACTTCCAGGCGTAGGTCCTAAGATTGCTCATCTGGTTATGATTGTTGGATGGAACAATGTCCAAGGGATATGTGTAGATACTCATGTCCACCGCATTTGCAATCGTCTTGGATGGGTTTCGAGATCAGGATCAAAACAGAAAACTTTGACACCGGAAGAAACTAGAAAAGCGCTGCAACGGTGGCTTCCGAAGGAAGAATGGGTTCCAATAAATCCTCTTTTGGTAGGATTTGGACGAACAATTTGTACTCCTCTACGGCCTCACTGTGGAGAGTGCAGTGTAAGTAGGTTCTGTCCATCAGCATATAAGGAAACTTCAAGCCTCTCATCCAAGTCCAAGAAGTTTACATTGAACAAGAAGCCTTAA
Protein:  
MSLVSLFGLGRIKVSVCGKTTKCFSSKTHPVSQVRISESNKRAKKSAQLQHVPETEIEDHNFPPTQEIREFAHTESNELSQSSSKCLLSEGCILGESPAHWKNVLEGIRQMRSFSADEHQPVDTIACEKDGDAQPPKERRFAVLASSLLSSQTKEHVTRGATQRLHENGLLTADAMNKADEETIKKLIYPYDGDIPSSIEELLLLPGVGPKIAHLVMIVGWNNVQGICVDTHVHRICNRLGWVSRSGSKQKTLTPEETRKALQRWLPKEEWVPINPLLVGFGRTICTPLRPHCGECSVSRFCPSAYKETSSLSSKSKKFTLNKKP